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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015869782.1_cds_XP_016433871.1_29986
CDS Infomation

[gene=LOC107760348] [db_xref=GeneID:107760348] [protein=glycogen synthase-like] [protein_id=XP_016433871.1] [location=complement(join(199411..199520,199720..199793,200369..200451,200713..200818,201026..201066,201627..201701,202536..202723,204190..204269,204483..204560,204921..205003,205198..205255,206623..206675,206767..206865,207333..207857,208288..208512))] [gbkey=CDS]
Sequence

ATGTTGAACGCAAAGATAATTGCCATGGATTTCACTTCCTGCTTGTCCTTCCCATCATCT
TTTGCGCCTAATGGAAACTCTAGCGATAGTATCAATTACCGTTCATGCTACAATATCAGC
AGTAAGGCCAATTTGTTGAAGCAACAATCCTACTTGTTCAAGGAATACTTGAACTCCCCC
TCGCGCAATTACAAAATTCATCTTTTTCCTCGAATTGATGCTCGGTTGGAAGCTGAGCAA
CTAGAAGGTTCAGAAGCTGATCGCGAGTCTGAAGGTTTTCGGTGGCCTTCTCCAAATGAC
GAAACTCCATTCTGGAAAAGGGAGTTTCCATTTTGGGACCTCAGCTCGGATGATCCTGCT
GGAGTGGAAAAGGATGCTGATCTATTGCACATTGTTCATGTGACAGCTGAAATGGCACCT
ATAGCAAAAGTAGGGGGTCTAGGTGACGTTGTAACGGGACTTGGACGTGCCTGTTTAAAG
CGTGGCCATAAAGTTGATGTCATGCTTCCTTTCTATGAATGTATTCCTAAGCATTTAATT
GATGAGCTAGCCTTGATCAAAACTTACAACTCATATCTTGACGGAAACTGGGTAGCCTGT
AATGCATATCGAGGAGAAGTTTCAGGCGTTCCGGTGATACTTATTGAACCATCCAACCAC
TTTTTCAAGGGGACAAACATATATGGAGGGTCATACAATGAGTTAGAGGCATATTTGTTT
TTCAGCCGTGCTTGCCTTGAATTGATGCAGGTAACAGGAACACAACCTGATATCATTCAT
GTACATGAATGGCAGACAGGTGCTTTACCTCTGTTTTACTGGGATATGTACCAATTTCTC
TCACTCCAGAAACCTAGAATTGTATTGACTATTCACAACATGGAGCATTATGGAGAATGC
AGACAAGAGCAACTCAGTAAGTTTGGTCTTGATGGATCTGCCTATGCAACTGAAGACAAG
GCCGTCGATGATCGCACAGTTGGCCATAATCCAGAGAGGTTAAGTTTGCTGAAAGGTGGC
ATAGTATACAGCAATGCTGTAGTTACAGTTTCACCGACGTATCTGAAGGAGACACTCTGT
TCCGGATGGCTTTCTAGTGCTTTGATGCGAAACCGTGATAAGTATTCTGGCATTTTAAAT
GGGATCGATACTGAAATGTGGAATCCAGCAACGGATGTTTATTTGCCTGCTAAGTTTGAT
GCCAGCAAAATTGAAGGGAAGAGGATATGCAAACAATTTGTTCAAAGGGGACTTGGTCTG
CCTTTTGAAAGCATCAAACAGAGTACTTGTGTGGCTGATCAAGTACCTTTGGTTATCTGC
ATTACTCGATTGGTCGCTCAAAAGGGTCTCCATCTTATCACTCATGCGATCAAGCATGTT
GAAGAACTAGGTGGACAGTTGGTGATTTTGGGCAGGGCTTCAGATGGTCGAGTTGAGAGA
GAATTTGAAGGTTTAGCAGAATTGTATAACAAGGGCCCCAACATCCGTATCCTTTTGATG
TACAGCGAGGAGCTGTCCCATATGCTCTATGCCGCTGCAGACATGGTCTTAGTGCCATCA
ATGTATGAGCCATGCGGGCTAGCACAGATGATTGGAATGCGCTATGGAGCTGTTCCCATA
GTTAGGAAGACGGGTGGTCTTGCTGACACGGTTTTTGACTTGGATGATCAATCTCAAGCT
GAGATTGCTAACGGGTTCGTCTTTGAAGGAATTGATGAAGGATCCTTTAATCGGGCTTTA
GACCGTGCATTTTCTTACTATCGAGAAAAACCAAATGAATGGAAAGCTGTTGTTCAGAAA
GTTATGCATATTGACAATAGCTGGAATAATACAGCAGGGAAATACATAGATATCTACAAT
TCCATAAAAGTGAGGTGA

Peptide Sequence

PEP ID

XP_016433871.1
PEP Infomation

PREDICTED: glycogen synthase-like [Nicotiana tabacum]
Sequence

MLNAKIIAMDFTSCLSFPSSFAPNGNSSDSINYRSCYNISSKANLLKQQSYLFKEYLNSP
SRNYKIHLFPRIDARLEAEQLEGSEADRESEGFRWPSPNDETPFWKREFPFWDLSSDDPA
GVEKDADLLHIVHVTAEMAPIAKVGGLGDVVTGLGRACLKRGHKVDVMLPFYECIPKHLI
DELALIKTYNSYLDGNWVACNAYRGEVSGVPVILIEPSNHFFKGTNIYGGSYNELEAYLF
FSRACLELMQVTGTQPDIIHVHEWQTGALPLFYWDMYQFLSLQKPRIVLTIHNMEHYGEC
RQEQLSKFGLDGSAYATEDKAVDDRTVGHNPERLSLLKGGIVYSNAVVTVSPTYLKETLC
SGWLSSALMRNRDKYSGILNGIDTEMWNPATDVYLPAKFDASKIEGKRICKQFVQRGLGL
PFESIKQSTCVADQVPLVICITRLVAQKGLHLITHAIKHVEELGGQLVILGRASDGRVER
EFEGLAELYNKGPNIRILLMYSEELSHMLYAAADMVLVPSMYEPCGLAQMIGMRYGAVPI
VRKTGGLADTVFDLDDQSQAEIANGFVFEGIDEGSFNRALDRAFSYYREKPNEWKAVVQK
VMHIDNSWNNTAGKYIDIYNSIKVR

Transcript Sequence

Gene sequence data has not been registered.